Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_26755 | Not Available | Positive | 5322350 - 5322478 | 4557.61 |
| eal domain-containing protein | DN590_26760 | Not Available | Positive | 5322475 - 5323182 | 25768.2 |
| integrase | DN590_26770 | Not Available | Positive | 5323221 - 5324525 | 48132.2 |
| mercuric transport protein | DN590_26775 | Not Available | Negative | 5324636 - 5324764 | 4217.2 |
| hg(ii)-responsive transcriptional regulator | DN590_26780 | Not Available | Positive | 5324836 - 5325291 | 16529.9 |
| hypothetical protein | DN590_26790 | Not Available | Positive | 5325969 - 5326394 | 15308.6 |
| hypothetical protein | DN590_26795 | Not Available | Positive | 5326943 - 5327251 | 11773.9 |
| hnh endonuclease | DN590_26800 | Not Available | Positive | 5327267 - 5328124 | 32382.0 |
| hypothetical protein | DN590_26805 | Not Available | Positive | 5328186 - 5328389 | 7584.15 |
| dna-binding protein | DN590_26810 | Not Available | Negative | 5328731 - 5329135 | 15084.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

