Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3-like element tn3 family transposase | DN590_26705 | Not Available | Negative | 5312918 - 5315923 | 113130.0 |
| recombinase family protein | DN590_26710 | Not Available | Positive | 5316087 - 5316644 | 20604.8 |
| class a beta-lactamase | DN590_26715 | Not Available | Positive | 5316762 - 5317015 | 8888.69 |
| is110 family transposase is4321 | DN590_26720 | Not Available | Negative | 5317541 - 5318545 | 37543.8 |
| mercuric resistance operon regulatory protein | DN590_26725 | Not Available | Negative | 5318624 - 5319058 | 15906.2 |
| mercuric ion transporter mert | DN590_26730 | Not Available | Positive | 5319130 - 5319480 | 12521.8 |
| mercury resistance system periplasmic binding protein merp | DN590_26735 | Not Available | Positive | 5319494 - 5319769 | 9414.52 |
| mercury transport protein merc | DN590_26740 | Not Available | Positive | 5319805 - 5320227 | 14980.7 |
| mercury(ii) reductase | DN590_26745 | Not Available | Positive | 5320279 - 5321973 | 58908.9 |
| transcriptional regulator | DN590_26750 | Not Available | Positive | 5321991 - 5322353 | 12738.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

