Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase (glutaredoxin) | DN590_26540 | Not Available | Negative | 5286761 - 5287186 | 15781.1 |
| arsenical efflux pump membrane protein arsb | DN590_26545 | Not Available | Negative | 5287199 - 5288488 | 45719.6 |
| transcriptional regulator | DN590_26550 | Not Available | Negative | 5288534 - 5288854 | 11998.7 |
| arsenical resistance protein arsh | DN590_26555 | Not Available | Positive | 5288941 - 5289645 | 26478.8 |
| isncy family transposase | DN590_26560 | Not Available | Negative | 5289678 - 5291081 | 53474.7 |
| sos response-associated peptidase | DN590_26570 | Not Available | Negative | 5291870 - 5292541 | 25134.9 |
| adenylosuccinate lyase | DN590_26575 | Not Available | Negative | 5293010 - 5294380 | 51613.8 |
| lysogenization regulator hfld | DN590_26580 | Not Available | Negative | 5294384 - 5295025 | 22883.9 |
| trna 2-thiouridine(34) synthase mnma | DN590_26585 | Not Available | Negative | 5295060 - 5296166 | 40940.7 |
| nudix hydrolase | DN590_26590 | Not Available | Negative | 5296220 - 5296681 | 17485.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

