Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DN590_26490 | Not Available | Negative | 5281388 - 5281599 | 8072.63 |
| hypothetical protein | DN590_26495 | Not Available | Positive | 5281640 - 5281954 | 11562.4 |
| hypothetical protein | DN590_26500 | Not Available | Positive | 5282028 - 5282285 | 10015.5 |
| hypothetical protein | DN590_26505 | Not Available | Positive | 5282344 - 5282577 | 8799.03 |
| hypothetical protein | DN590_26510 | Not Available | Positive | 5282623 - 5282877 | 10058.8 |
| hypothetical protein | DN590_26515 | Not Available | Positive | 5282915 - 5283202 | 10892.2 |
| hypothetical protein | DN590_26520 | Not Available | Positive | 5283272 - 5283469 | 7344.24 |
| hypothetical protein | DN590_26525 | Not Available | Positive | 5283610 - 5283885 | 10131.9 |
| sulp family inorganic anion transporter | DN590_26530 | Not Available | Positive | 5284377 - 5285855 | 52829.8 |
| universal stress protein | DN590_26535 | Not Available | Positive | 5285874 - 5286701 | 30364.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

