Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translesion error-prone dna polymerase v subunit umuc | DN590_26440 | Not Available | Positive | 5273525 - 5274784 | 47570.4 |
| dsba family protein | DN590_26445 | Not Available | Negative | 5274830 - 5275639 | 29478.5 |
| hypothetical protein | DN590_26450 | Not Available | Positive | 5275746 - 5276357 | 22790.2 |
| hypothetical protein | DN590_26455 | Not Available | Negative | 5276417 - 5276677 | 9958.21 |
| hypothetical protein | DN590_26460 | Not Available | Negative | 5276873 - 5277265 | 14025.0 |
| thiol:disulfide interchange protein | DN590_26465 | Not Available | Negative | 5277290 - 5278039 | 27096.0 |
| lytic transglycosylase | DN590_26470 | Not Available | Positive | 5278187 - 5278726 | 20651.6 |
| hypothetical protein | DN590_26475 | Not Available | Positive | 5278809 - 5279366 | 21012.1 |
| hnh endonuclease | DN590_26480 | Not Available | Positive | 5279490 - 5280551 | 39465.0 |
| hypothetical protein | DN590_26485 | Not Available | Positive | 5280561 - 5281067 | 19359.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

