Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | DN590_26370 | Not Available | Negative | 5266471 - 5266647 | 6565.82 |
| sulfonamide-resistant dihydropteroate synthase sul2 | DN590_26380 | Not Available | Positive | 5266977 - 5267792 | 28471.1 |
| phosphoglucosamine mutase | DN590_26385 | Not Available | Positive | 5267879 - 5268181 | 11074.5 |
| hypothetical protein | DN590_26390 | Not Available | Negative | 5268075 - 5268326 | 9461.61 |
| is91 family transposase | DN590_26395 | Not Available | Negative | 5268357 - 5269850 | 55631.3 |
| hypothetical protein | DN590_26400 | Not Available | Negative | 5270061 - 5270285 | 8498.13 |
| resolvase | DN590_26405 | Not Available | Negative | 5270282 - 5271019 | 26909.3 |
| hypothetical protein | DN590_26410 | Not Available | Positive | 5271126 - 5271617 | 17318.9 |
| is6 family transposase | DN590_26415 | Not Available | Negative | 5271651 - 5271725 | 2724.26 |
| peptidase | DN590_26435 | Not Available | Positive | 5273107 - 5273541 | 15946.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

