Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | DN590_26270 | Not Available | Negative | 5246673 - 5247428 | 28718.4 |
| sam-dependent methyltransferase | DN590_26275 | Not Available | Positive | 5247462 - 5248184 | 27249.4 |
| ribonuclease hi | DN590_26280 | Not Available | Negative | 5248181 - 5248648 | 17575.9 |
| dna polymerase iii subunit epsilon | DN590_26285 | Not Available | Positive | 5248713 - 5249441 | 27122.4 |
| Trna-asp | Not Available | Not Available | Positive | 5249575 - 5249651 | Not Available |
| hypothetical protein | DN590_26295 | Not Available | Negative | 5249807 - 5250325 | 19268.0 |
| transcriptional regulator | DN590_26300 | Not Available | Negative | 5250327 - 5251115 | 29435.6 |
| toxin | DN590_26305 | Not Available | Positive | 5251272 - 5251589 | 12184.8 |
| Trna-thr | Not Available | Not Available | Positive | 5251971 - 5252046 | Not Available |
| isoprenylcysteine carboxylmethyltransferase family protein | DN590_26315 | Not Available | Negative | 5252212 - 5252676 | 17574.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

