Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | DN590_26120 | Not Available | Negative | 5217870 - 5219126 | 44677.8 |
| (2fe-2s)-binding protein | DN590_26125 | Not Available | Negative | 5219113 - 5219367 | 9023.13 |
| d-amino-acid oxidase | DN590_26130 | Not Available | Negative | 5219364 - 5220467 | 39220.3 |
| 4-hydroxyproline epimerase | DN590_26135 | Not Available | Negative | 5220464 - 5221405 | 34367.6 |
| hypothetical protein | DN590_26140 | Not Available | Positive | 5221439 - 5221621 | 6829.5 |
| arac family transcriptional regulator | DN590_26145 | Not Available | Positive | 5221714 - 5222529 | 30402.1 |
| dihydrodipicolinate synthase family protein | DN590_26150 | Not Available | Positive | 5222668 - 5223588 | 33302.1 |
| aldehyde dehydrogenase (nadp(+)) | DN590_26155 | Not Available | Positive | 5223603 - 5225210 | 56610.0 |
| apc family permease | DN590_26160 | Not Available | Positive | 5225222 - 5226823 | 57718.5 |
| oxidoreductase | DN590_26165 | Not Available | Positive | 5226835 - 5227845 | 35605.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

