Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DN590_26065 | Not Available | Positive | 5207844 - 5208875 | 38366.8 |
| laci family transcriptional regulator | DN590_26070 | Not Available | Positive | 5209162 - 5210115 | 33143.0 |
| sugar abc transporter atp-binding protein | DN590_26075 | Not Available | Positive | 5210180 - 5211712 | 55720.2 |
| ribose abc transporter permease | DN590_26080 | Not Available | Positive | 5211699 - 5212718 | 35537.9 |
| hypothetical protein | DN590_26085 | Not Available | Positive | 5212796 - 5214166 | 51733.8 |
| carbohydrate kinase | DN590_26090 | Not Available | Positive | 5214163 - 5215083 | 33160.1 |
| pin domain-containing protein | DN590_26100 | Not Available | Negative | 5215629 - 5216045 | 15055.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | DN590_26105 | Not Available | Negative | 5216042 - 5216272 | 8722.22 |
| hypothetical protein | DN590_26110 | Not Available | Positive | 5216297 - 5216512 | 8028.98 |
| dna helicase uvrd | DN590_26115 | Not Available | Negative | 5216525 - 5217547 | 39490.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

