Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase (acetylating) | DN590_25915 | Not Available | Negative | 5176217 - 5177167 | 33031.1 |
| 2-keto-4-pentenoate hydratase | DN590_25920 | Not Available | Negative | 5177164 - 5177973 | 28990.6 |
| alpha/beta fold hydrolase | DN590_25925 | Not Available | Negative | 5177983 - 5178849 | 32056.3 |
| 3-carboxyethylcatechol 2,3-dioxygenase | DN590_25930 | Not Available | Negative | 5178878 - 5179822 | 34052.8 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | DN590_25935 | Not Available | Negative | 5179824 - 5181488 | 61639.4 |
| dna-binding transcriptional activator mhpr | DN590_25940 | Not Available | Positive | 5181680 - 5182492 | 30476.9 |
| antibiotic biosynthesis monooxygenase | DN590_25945 | Not Available | Positive | 5182628 - 5182930 | 11761.0 |
| hypothetical protein | DN590_25950 | Not Available | Negative | 5183289 - 5184185 | 34152.0 |
| nuclease | DN590_25955 | Not Available | Negative | 5184188 - 5184703 | 19126.1 |
| dna cytosine methyltransferase | DN590_25960 | Not Available | Positive | 5184918 - 5186345 | 54311.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

