Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase family protein | DN590_25730 | Not Available | Negative | 5138440 - 5139303 | 31897.6 |
| n-acetyltransferase | DN590_25745 | Not Available | Positive | 5140651 - 5141166 | 19053.1 |
| methyl-accepting chemotaxis protein | DN590_25750 | Not Available | Negative | 5141194 - 5142861 | 60118.1 |
| mfs transporter | DN590_25770 | Not Available | Positive | 5145489 - 5146823 | 49230.3 |
| 2-dehydro-3-deoxyglucarate aldolase | DN590_25775 | Not Available | Positive | 5146839 - 5147609 | 27342.6 |
| 2-hydroxy-3-oxopropionate reductase | DN590_25780 | Not Available | Positive | 5147640 - 5148530 | 30616.5 |
| glycerate 2-kinase | DN590_25785 | Not Available | Positive | 5148596 - 5149741 | 39353.1 |
| duf3258 domain-containing protein | DN590_25795 | Not Available | Positive | 5150374 - 5151834 | 56061.7 |
| hypothetical protein | DN590_25800 | Not Available | Positive | 5152219 - 5152917 | 26556.0 |
| recombinase family protein | DN590_25805 | Not Available | Negative | 5153224 - 5153802 | 21354.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

