Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein | DN590_25665 | Not Available | Negative | 5129713 - 5130171 | 17436.5 |
| duf905 domain-containing protein | DN590_25670 | Not Available | Negative | 5130269 - 5130508 | 9014.55 |
| hypothetical protein | DN590_25675 | Not Available | Negative | 5130585 - 5131052 | 17026.6 |
| hypothetical protein | DN590_25680 | Not Available | Negative | 5131076 - 5131519 | 16857.9 |
| hypothetical protein | DN590_25685 | Not Available | Negative | 5131519 - 5131755 | 7659.89 |
| wyl domain-containing protein | DN590_25690 | Not Available | Negative | 5131796 - 5132497 | 26366.1 |
| duf945 domain-containing protein | DN590_25695 | Not Available | Negative | 5132714 - 5133532 | 30962.1 |
| hypothetical protein | DN590_25710 | Not Available | Negative | 5135212 - 5135814 | 21683.7 |
| arac family transcriptional regulator | DN590_25715 | Not Available | Positive | 5136048 - 5137199 | 43312.6 |
| hypothetical protein | DN590_25720 | Not Available | Negative | 5137327 - 5137908 | 21627.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

