Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | DN590_01005 | Not Available | Positive | 216081 - 217409 | 49579.6 |
| lysr family transcriptional regulator | DN590_01010 | Not Available | Negative | 217427 - 218323 | 33889.3 |
| cysteine/o-acetylserine transporter | DN590_01015 | Not Available | Positive | 218426 - 219013 | 21473.7 |
| autonomous glycyl radical cofactor grca | DN590_01020 | Not Available | Negative | 219093 - 219476 | 14253.9 |
| uracil-dna glycosylase | DN590_01025 | Not Available | Positive | 219794 - 220483 | 25611.6 |
| trna/rrna methyltransferase | DN590_01030 | Not Available | Negative | 220517 - 221596 | 39292.3 |
| thioredoxin trxc | DN590_01040 | Not Available | Positive | 221804 - 222223 | 15504.6 |
| dtw domain-containing protein | DN590_01045 | Not Available | Positive | 222293 - 222991 | 25869.2 |
| protein lysine acetyltransferase | DN590_01050 | Not Available | Positive | 223028 - 225688 | 97531.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DN590_01055 | Not Available | Positive | 225803 - 227158 | 52691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

