Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | DN590_25440 | Not Available | Positive | 5087511 - 5088182 | 25129.8 |
| hypothetical protein | DN590_25455 | Not Available | Positive | 5089496 - 5089885 | 13981.9 |
| peptide transporter | DN590_25460 | Not Available | Negative | 5089947 - 5090951 | 38463.9 |
| para family protein | DN590_25465 | Not Available | Negative | 5090948 - 5092201 | 47050.1 |
| conjugal transfer protein | DN590_25470 | Not Available | Negative | 5096040 - 5098721 | 101519.0 |
| trhv | DN590_25475 | Not Available | Negative | 5098730 - 5099680 | 33927.2 |
| dsbc family protein | DN590_25480 | Not Available | Negative | 5099690 - 5100523 | 30605.1 |
| transcriptional regulator | DN590_25485 | Not Available | Negative | 5100561 - 5100983 | 16567.9 |
| conjugal transfer protein trab | DN590_25490 | Not Available | Negative | 5101051 - 5102406 | 48515.8 |
| hypothetical protein | DN590_25495 | Not Available | Negative | 5102396 - 5102857 | 17163.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

