Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanine(745)-n(1))-methyltransferase | DN590_25340 | Not Available | Negative | 5068570 - 5069379 | 29967.9 |
| peptidoglycan glycosyltransferase ftsi | DN590_25345 | Not Available | Negative | 5069443 - 5071188 | 63075.8 |
| cold-shock protein cspc | DN590_25350 | Not Available | Negative | 5071408 - 5071617 | 7402.76 |
| duf2627 domain-containing protein | DN590_25355 | Not Available | Negative | 5071630 - 5071773 | 5238.46 |
| hypothetical protein | DN590_25360 | Not Available | Positive | 5071735 - 5071998 | 10023.8 |
| hypothetical protein | DN590_25365 | Not Available | Negative | 5072410 - 5072694 | 10343.5 |
| phop/phoq regulator mgrb | DN590_25370 | Not Available | Negative | 5072769 - 5072912 | 5560.21 |
| hypothetical protein | DN590_25375 | Not Available | Positive | 5073077 - 5073316 | 8370.48 |
| dna-binding transcriptional regulator kdgr | DN590_25380 | Not Available | Negative | 5073431 - 5074222 | 30105.2 |
| mfs transporter | DN590_25385 | Not Available | Positive | 5074397 - 5075770 | 48114.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

