Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DN590_25115 | Not Available | Negative | 5023019 - 5024077 | 39111.4 |
| hypothetical protein | DN590_25120 | Not Available | Negative | 5024135 - 5025112 | 38226.1 |
| hypothetical protein | DN590_25125 | Not Available | Negative | 5025173 - 5025550 | 14065.2 |
| hypothetical protein | DN590_25130 | Not Available | Negative | 5025608 - 5026480 | 33536.7 |
| atp-dependent helicase | DN590_25135 | Not Available | Negative | 5026875 - 5028659 | 67344.2 |
| hypothetical protein | DN590_25140 | Not Available | Positive | 5028839 - 5029711 | 31379.9 |
| conjugal transfer protein tran | DN590_25145 | Not Available | Negative | 5029740 - 5032928 | 116908.0 |
| plasmid transfer protein | DN590_25150 | Not Available | Negative | 5032947 - 5033957 | 37005.9 |
| conjugal transfer protein | DN590_25155 | Not Available | Negative | 5034147 - 5035658 | 56474.1 |
| signal peptidase i | DN590_25160 | Not Available | Negative | 5035645 - 5036157 | 19410.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

