Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | DN590_00945 | Not Available | Negative | 205595 - 206500 | 33798.9 |
| ribonuclease 3 | DN590_00950 | Not Available | Negative | 206497 - 207177 | 25507.5 |
| signal peptidase i | DN590_00960 | Not Available | Negative | 207447 - 208421 | 35928.4 |
| elongation factor 4 | DN590_00965 | Not Available | Negative | 208437 - 210236 | 66622.2 |
| soxr-reducing system protein rsec | DN590_00970 | Not Available | Negative | 210507 - 210971 | 16156.8 |
| sigma-e factor regulatory protein rseb | DN590_00975 | Not Available | Negative | 210968 - 211924 | 35809.6 |
| anti-sigma-e factor rsea | DN590_00980 | Not Available | Negative | 211924 - 212574 | 24244.9 |
| ecf rna polymerase sigma-e factor | DN590_00985 | Not Available | Negative | 212606 - 213181 | 21727.0 |
| l-aspartate oxidase | DN590_00995 | Not Available | Positive | 213606 - 215228 | 60180.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | DN590_01000 | Not Available | Negative | 215213 - 215950 | 27432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

