Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | DN590_24960 | Not Available | Negative | 4990598 - 4991152 | 20028.1 |
| hypothetical protein | DN590_24965 | Not Available | Positive | 4991180 - 4991392 | 8054.2 |
| crp/fnr family transcriptional regulator | DN590_24975 | Not Available | Negative | 4991686 - 4992405 | 27142.1 |
| glutamate-5-semialdehyde dehydrogenase | DN590_24980 | Not Available | Negative | 4992684 - 4993934 | 44697.0 |
| glutamate 5-kinase | DN590_24985 | Not Available | Negative | 4993946 - 4995049 | 39072.9 |
| phosphoporin phoe | DN590_24990 | Not Available | Positive | 4995339 - 4996394 | 38853.9 |
| crl family rna polymerase assembly factor | DN590_24995 | Not Available | Negative | 4996451 - 4996852 | 15609.6 |
| esterase frsa | DN590_25000 | Not Available | Negative | 4996910 - 4998154 | 46916.2 |
| xanthine phosphoribosyltransferase | DN590_25005 | Not Available | Negative | 4998255 - 4998713 | 16956.6 |
| cytosol nonspecific dipeptidase | DN590_25010 | Not Available | Positive | 4998975 - 5000432 | 52700.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

