Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | DN590_24710 | Not Available | Negative | 4959897 - 4962359 | 92148.4 |
| n-acetyltransferase | DN590_24715 | Not Available | Positive | 4963176 - 4963712 | 19905.0 |
| integrase | DN590_24720 | Not Available | Positive | 4963862 - 4965097 | 47351.9 |
| elongation factor tu | DN590_24725 | Not Available | Positive | 4965115 - 4965329 | 7641.44 |
| ferredoxin | DN590_24730 | Not Available | Negative | 4965422 - 4965580 | 6228.11 |
| bacterioferritin-associated ferredoxin | DN590_24735 | Not Available | Positive | 4965515 - 4965709 | 7473.22 |
| bacterioferritin | DN590_24740 | Not Available | Positive | 4965781 - 4966257 | 18326.0 |
| prepilin peptidase | DN590_24745 | Not Available | Negative | 4966254 - 4966721 | 16915.2 |
| 30s ribosomal protein s10 | DN590_24750 | Not Available | Positive | 4967101 - 4967412 | 11767.3 |
| 50s ribosomal protein l3 | DN590_24755 | Not Available | Positive | 4967445 - 4968074 | 22243.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

