Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | DN590_24600 | Not Available | Negative | 4939346 - 4940524 | 41333.6 |
| lysr family transcriptional regulator | DN590_24605 | Not Available | Negative | 4940627 - 4941511 | 32793.3 |
| na(+)-translocating nadh-quinone reductase subunit e | DN590_24610 | Not Available | Positive | 4941613 - 4942068 | 17437.6 |
| transporter | DN590_24615 | Not Available | Positive | 4942211 - 4943440 | 44924.7 |
| transcriptional regulator | DN590_24625 | Not Available | Negative | 4943581 - 4943760 | 6225.48 |
| hypothetical protein | DN590_24630 | Not Available | Negative | 4943846 - 4944043 | 7362.03 |
| transcriptional repressor rcnr | DN590_24635 | Not Available | Negative | 4944226 - 4944498 | 10123.4 |
| nickel/cobalt efflux protein rcna | DN590_24640 | Not Available | Positive | 4944619 - 4945515 | 32849.6 |
| deaminase | DN590_24645 | Not Available | Negative | 4945561 - 4946943 | 50329.4 |
| carbamate kinase | DN590_24650 | Not Available | Negative | 4946956 - 4947906 | 34041.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

