Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase mltf | DN590_00895 | Not Available | Positive | 197172 - 198722 | 58228.1 |
| trna adenosine(34) deaminase tada | DN590_00900 | Not Available | Negative | 198763 - 199299 | 19848.1 |
| phosphatidylglycerophosphatase c | DN590_00905 | Not Available | Negative | 199328 - 199963 | 24275.6 |
| pts sugar transporter subunit iic | DN590_00910 | Not Available | Negative | 199967 - 201331 | 47528.8 |
| n-acetylmuramic acid 6-phosphate etherase | DN590_00915 | Not Available | Negative | 201341 - 202234 | 30850.4 |
| murr/rpir family transcriptional regulator | DN590_00920 | Not Available | Positive | 202352 - 203200 | 31007.8 |
| 4fe-4s dicluster domain-containing protein | DN590_00925 | Not Available | Positive | 203256 - 203516 | 9741.72 |
| holo-acp synthase | DN590_00930 | Not Available | Negative | 203623 - 204003 | 14054.0 |
| pyridoxine 5'-phosphate synthase | DN590_00935 | Not Available | Negative | 204003 - 204734 | 26504.0 |
| dna repair protein reco | DN590_00940 | Not Available | Negative | 204750 - 205460 | 26487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

