Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_24500 | Not Available | Negative | 4915386 - 4915934 | 21006.9 |
| electron transporter yccm | DN590_24505 | Not Available | Negative | 4916079 - 4917173 | 40900.0 |
| diguanylate cyclase | DN590_24510 | Not Available | Negative | 4917394 - 4918782 | 52726.1 |
| hypothetical protein | DN590_24515 | Not Available | Negative | 4918862 - 4919494 | 23167.7 |
| duf1471 domain-containing protein | DN590_24520 | Not Available | Positive | 4919760 - 4920035 | 9887.81 |
| propionate catabolism operon regulatory protein prpr | DN590_24525 | Not Available | Negative | 4920068 - 4921678 | 59519.1 |
| methylisocitrate lyase | DN590_24530 | Not Available | Positive | 4921932 - 4922813 | 31838.2 |
| 2-methylcitrate synthase | DN590_24535 | Not Available | Positive | 4922894 - 4924063 | 43146.6 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | DN590_24540 | Not Available | Positive | 4924104 - 4925555 | 53885.7 |
| propionate--coa ligase | DN590_24545 | Not Available | Positive | 4925596 - 4927482 | 69337.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

