Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_24450 | Not Available | Positive | 4904138 - 4904770 | 21957.6 |
| histidine kinase | DN590_24455 | Not Available | Negative | 4904845 - 4908087 | 120755.0 |
| dna-binding response regulator | DN590_24460 | Not Available | Negative | 4908092 - 4908706 | 22802.3 |
| hypothetical protein | DN590_24465 | Not Available | Positive | 4908892 - 4909521 | 24614.8 |
| hypothetical protein | DN590_24470 | Not Available | Positive | 4909620 - 4909856 | 8844.7 |
| lyse family translocator | DN590_24475 | Not Available | Negative | 4909958 - 4910587 | 22677.6 |
| lysr family transcriptional regulator | DN590_24480 | Not Available | Positive | 4910697 - 4911602 | 33418.1 |
| arac family transcriptional regulator | DN590_24485 | Not Available | Positive | 4911726 - 4912709 | 36868.3 |
| ferrioxamine b receptor foxa | DN590_24490 | Not Available | Positive | 4912831 - 4914939 | 78532.6 |
| hypothetical protein | DN590_24495 | Not Available | Positive | 4915264 - 4915467 | 7782.75 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

