Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DN590_24195 | Not Available | Negative | 4845877 - 4847466 | 57302.4 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DN590_24205 | Not Available | Positive | 4847914 - 4847982 | 2566.14 |
| hok/gef family protein | DN590_24210 | Not Available | Positive | 4848054 - 4848212 | 5927.58 |
| hypothetical protein | DN590_24215 | Not Available | Negative | 4848821 - 4849141 | 12463.0 |
| hypothetical protein | DN590_24220 | Not Available | Negative | 4849423 - 4849626 | 7390.03 |
| hypothetical protein | DN590_24225 | Not Available | Negative | 4849673 - 4850023 | 12930.6 |
| hypothetical protein | DN590_24230 | Not Available | Negative | 4850083 - 4850685 | 21995.0 |
| hypothetical protein | DN590_24235 | Not Available | Negative | 4850781 - 4851725 | 35260.3 |
| hypothetical protein | DN590_24240 | Not Available | Positive | 4852182 - 4852412 | 8607.17 |
| dna-binding protein | DN590_24245 | Not Available | Positive | 4852829 - 4854013 | 43252.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

