Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts lactose/cellobiose transporter subunit iia | DN590_24095 | Not Available | Negative | 4828463 - 4828780 | 11600.2 |
| pts sugar transporter subunit iib | DN590_24100 | Not Available | Negative | 4828785 - 4829090 | 10812.6 |
| cold-shock protein | DN590_24105 | Not Available | Positive | 4830183 - 4830395 | 7598.93 |
| 2-iminoacetate synthase thih | DN590_24110 | Not Available | Negative | 4830515 - 4831648 | 43339.6 |
| thiazole synthase | DN590_24115 | Not Available | Negative | 4831645 - 4832415 | 26763.7 |
| sulfur carrier protein this | DN590_24120 | Not Available | Negative | 4832417 - 4832617 | 7263.75 |
| molybdopterin biosynthesis protein moeb | DN590_24125 | Not Available | Negative | 4832598 - 4833356 | 27295.9 |
| thiamine phosphate synthase | DN590_24130 | Not Available | Negative | 4833349 - 4833984 | 23076.7 |
| phosphomethylpyrimidine synthase thic | DN590_24135 | Not Available | Negative | 4833984 - 4835882 | 70844.1 |
| rsd/algq family anti-sigma factor | DN590_24140 | Not Available | Negative | 4836139 - 4836627 | 18738.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

