Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | DN590_00845 | Not Available | Positive | 183142 - 183462 | 11322.2 |
| 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | DN590_00850 | Not Available | Positive | 183459 - 184271 | 28478.2 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | DN590_00855 | Not Available | Positive | 184281 - 185483 | 43383.2 |
| serine hydroxymethyltransferase | DN590_00860 | Not Available | Negative | 185576 - 186829 | 45498.5 |
| no-inducible flavohemoprotein | DN590_00865 | Not Available | Positive | 187156 - 188346 | 43686.9 |
| nitrogen regulatory protein p-ii | DN590_00870 | Not Available | Negative | 188448 - 188786 | 12430.2 |
| two-component system response regulator glrr | DN590_00875 | Not Available | Negative | 188847 - 190184 | 49293.5 |
| two-component system qseef-associated lipoprotein qseg | DN590_00880 | Not Available | Negative | 190181 - 190924 | 27868.1 |
| two component system sensor histidine kinase qsee/glrk | DN590_00885 | Not Available | Negative | 190947 - 192377 | 53407.8 |
| phosphoribosylformylglycinamidine synthase | DN590_00890 | Not Available | Negative | 193027 - 196914 | 141442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

