Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4165 domain-containing protein | DN590_23940 | Not Available | Negative | 4791419 - 4793836 | 87499.0 |
| hypothetical protein | DN590_23945 | Not Available | Negative | 4794211 - 4794462 | 9634.4 |
| hypothetical protein | DN590_23950 | Not Available | Negative | 4794495 - 4794683 | 7085.55 |
| hypothetical protein | DN590_23955 | Not Available | Negative | 4794670 - 4794927 | 9412.24 |
| hypothetical protein | DN590_23960 | Not Available | Negative | 4794920 - 4795351 | 15969.7 |
| hypothetical protein | DN590_23965 | Not Available | Negative | 4795455 - 4795979 | 19491.3 |
| hypothetical protein | DN590_23970 | Not Available | Positive | 4796302 - 4797066 | 28170.7 |
| sam-dependent methyltransferase | DN590_23975 | Not Available | Positive | 4797147 - 4797908 | 28283.2 |
| hypothetical protein | DN590_23980 | Not Available | Positive | 4798002 - 4798265 | 9910.68 |
| hypothetical protein | DN590_23985 | Not Available | Positive | 4798309 - 4798896 | 21959.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

