Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_23790 | Not Available | Negative | 4764605 - 4765000 | 14027.7 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | DN590_23795 | Not Available | Negative | 4765060 - 4769022 | 144013.0 |
| sodium/proline symporter putp | DN590_23800 | Not Available | Positive | 4769445 - 4770953 | 54463.4 |
| ftr1 family protein | DN590_23805 | Not Available | Positive | 4771167 - 4772000 | 30497.0 |
| ferrous iron transporter | DN590_23810 | Not Available | Positive | 4772059 - 4773186 | 41027.6 |
| deferrochelatase/peroxidase efeb | DN590_23815 | Not Available | Positive | 4773192 - 4774475 | 46726.7 |
| phosphate starvation-inducible protein phoh | DN590_23820 | Not Available | Positive | 4774872 - 4775786 | 33556.3 |
| Trna-ser | Not Available | Not Available | Positive | 4776111 - 4776198 | Not Available |
| glyoxylate/hydroxypyruvate reductase ghra | DN590_23830 | Not Available | Positive | 4776435 - 4777373 | 34714.6 |
| phosphatase | DN590_23835 | Not Available | Positive | 4777584 - 4778321 | 26944.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

