Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | DN590_23740 | Not Available | Positive | 4757279 - 4757902 | 22741.6 |
| protein disulfide oxidoreductase | DN590_23745 | Not Available | Positive | 4757892 - 4758398 | 18811.9 |
| sulfite exporter taue/safe family protein | DN590_23750 | Not Available | Positive | 4758533 - 4759288 | 26478.6 |
| transcriptional regulator | DN590_23755 | Not Available | Positive | 4759358 - 4760065 | 26071.6 |
| bifunctional glucose-1-phosphatase/inositol phosphatase | DN590_23760 | Not Available | Positive | 4760153 - 4761394 | 45805.4 |
| hypothetical protein | DN590_23765 | Not Available | Negative | 4761432 - 4761659 | 8678.06 |
| nad(p)h:quinone oxidoreductase | DN590_23770 | Not Available | Negative | 4761680 - 4762276 | 20911.9 |
| stress-induced protein | DN590_23775 | Not Available | Positive | 4762662 - 4762835 | 5937.62 |
| dmt family transporter | DN590_23780 | Not Available | Positive | 4762997 - 4763911 | 32064.4 |
| hth-type transcriptional regulator rutr | DN590_23785 | Not Available | Positive | 4763970 - 4764608 | 23911.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

