Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | DN590_23690 | Not Available | Positive | 4748388 - 4749095 | 25624.9 |
| mfs transporter tsga | DN590_23695 | Not Available | Positive | 4749134 - 4750288 | 41459.1 |
| hypothetical protein | DN590_23700 | Not Available | Positive | 4750385 - 4751221 | 32102.7 |
| crp/fnr family transcriptional regulator | DN590_23705 | Not Available | Negative | 4751269 - 4751955 | 26705.1 |
| chaperone modulator cbpm | DN590_23710 | Not Available | Negative | 4752077 - 4752370 | 11229.4 |
| curved dna-binding protein | DN590_23715 | Not Available | Negative | 4752370 - 4753290 | 34422.8 |
| thiol:disulfide interchange protein dsba | DN590_23720 | Not Available | Negative | 4753496 - 4754119 | 22957.7 |
| voc family protein | DN590_23725 | Not Available | Positive | 4754514 - 4754933 | 15632.9 |
| copper resistance protein | DN590_23730 | Not Available | Positive | 4754991 - 4755353 | 13136.6 |
| protein-disulfide reductase | DN590_23735 | Not Available | Positive | 4755402 - 4757282 | 67723.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

