Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo(2)-lipid iv(a) palmitoleoyltransferase | DN590_23210 | Not Available | Negative | 4666861 - 4667769 | 34340.2 |
| hypothetical protein | DN590_23215 | Not Available | Negative | 4667953 - 4668141 | 7179.79 |
| hypothetical protein | DN590_23220 | Not Available | Positive | 4668654 - 4668887 | 8918.91 |
| cyclic beta 1-2 glucan synthetase | DN590_23225 | Not Available | Negative | 4668907 - 4677489 | 320278.0 |
| cold-shock protein | DN590_23230 | Not Available | Negative | 4677891 - 4678103 | 7593.39 |
| cold-shock protein | DN590_23235 | Not Available | Positive | 4678370 - 4678588 | 7848.4 |
| hypothetical protein | DN590_23240 | Not Available | Positive | 4678889 - 4679116 | 8426.14 |
| dna-binding protein | DN590_23245 | Not Available | Positive | 4679583 - 4680047 | 17993.6 |
| integrase | DN590_23255 | Not Available | Negative | 4680345 - 4680947 | 22847.9 |
| voc family protein | DN590_23260 | Not Available | Negative | 4681059 - 4681445 | 15157.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

