Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_23160 | Not Available | Positive | 4655317 - 4655502 | 6986.75 |
| lysr family transcriptional regulator | DN590_23165 | Not Available | Negative | 4655489 - 4656397 | 33981.8 |
| carboxymuconolactone decarboxylase family protein | DN590_23170 | Not Available | Positive | 4656487 - 4656864 | 13389.2 |
| bifunctional metallophosphatase/5'-nucleotidase | DN590_23175 | Not Available | Negative | 4656903 - 4658459 | 56329.1 |
| cytoplasmic protein | DN590_23180 | Not Available | Positive | 4658593 - 4659765 | 44590.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | DN590_23185 | Not Available | Negative | 4659810 - 4662242 | 88791.8 |
| cystathionine gamma-synthase | DN590_23190 | Not Available | Negative | 4662245 - 4663405 | 41450.5 |
| met repressor | DN590_23195 | Not Available | Positive | 4663671 - 4663988 | 12194.5 |
| mfs transporter | DN590_23200 | Not Available | Negative | 4664047 - 4665471 | 51996.2 |
| hypothetical protein | DN590_23205 | Not Available | Negative | 4665550 - 4666230 | 26719.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

