Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose-like transporter subunit iib | DN590_23110 | Not Available | Negative | 4642390 - 4642746 | 13111.8 |
| [formate-c-acetyltransferase]-activating enzyme | DN590_23115 | Not Available | Negative | 4642748 - 4643626 | 32612.7 |
| formate c-acetyltransferase | DN590_23120 | Not Available | Negative | 4643592 - 4645889 | 85985.9 |
| pts fructose-like transporter subunit iib | DN590_23125 | Not Available | Negative | 4645991 - 4646311 | 11186.6 |
| pts fructose transporter subunit eiic | DN590_23130 | Not Available | Negative | 4646326 - 4647405 | 37208.9 |
| phosphoenolpyruvate--protein phosphotransferase | DN590_23135 | Not Available | Positive | 4647714 - 4650215 | 92255.5 |
| fructose-6-phosphate aldolase | DN590_23140 | Not Available | Positive | 4650231 - 4650893 | 23516.5 |
| glycerol dehydrogenase | DN590_23145 | Not Available | Positive | 4650906 - 4652009 | 38611.3 |
| catalase/peroxidase hpi | DN590_23150 | Not Available | Negative | 4652096 - 4654276 | 79662.4 |
| methylenetetrahydrofolate reductase | DN590_23155 | Not Available | Negative | 4654444 - 4655331 | 33054.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

