Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor fabr | DN590_23055 | Not Available | Negative | 4628491 - 4629126 | 24060.9 |
| si-specific nad(p)(+) transhydrogenase | DN590_23060 | Not Available | Positive | 4629318 - 4630718 | 51545.5 |
| dna-binding transcriptional regulator oxyr | DN590_23065 | Not Available | Negative | 4630701 - 4631618 | 34127.7 |
| argininosuccinate lyase | DN590_23075 | Not Available | Negative | 4631952 - 4633322 | 50269.0 |
| acetylglutamate kinase | DN590_23080 | Not Available | Negative | 4633431 - 4634204 | 27018.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DN590_23085 | Not Available | Negative | 4634215 - 4635219 | 35839.0 |
| acetylornithine deacetylase | DN590_23090 | Not Available | Positive | 4635375 - 4636526 | 42238.6 |
| phosphoenolpyruvate carboxylase | DN590_23095 | Not Available | Positive | 4636796 - 4639447 | 99092.2 |
| phosphoethanolamine transferase cpta | DN590_23100 | Not Available | Positive | 4639658 - 4641391 | 66192.6 |
| arac family transcriptional regulator | DN590_23105 | Not Available | Positive | 4641543 - 4642403 | 32714.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

