Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | DN590_22800 | Not Available | Positive | 4579361 - 4581583 | 83913.9 |
| apc family permease | DN590_22805 | Not Available | Negative | 4581770 - 4583158 | 50664.5 |
| glutamine synthetase | DN590_22810 | Not Available | Negative | 4583502 - 4584920 | 52963.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | DN590_22815 | Not Available | Positive | 4585133 - 4585897 | 27869.4 |
| hth-type transcriptional regulator puur | DN590_22820 | Not Available | Positive | 4585923 - 4586480 | 20007.8 |
| aldehyde dehydrogenase puuc | DN590_22825 | Not Available | Positive | 4586619 - 4588106 | 53516.5 |
| fad-binding oxidoreductase | DN590_22830 | Not Available | Positive | 4588109 - 4589389 | 47141.2 |
| [ni/fe] hydrogenase small subunit | DN590_22835 | Not Available | Positive | 4589598 - 4590725 | 40921.9 |
| hydrogenase 1 large subunit | DN590_22840 | Not Available | Positive | 4590722 - 4592515 | 66531.5 |
| ni/fe-hydrogenase, b-type cytochrome subunit | DN590_22845 | Not Available | Positive | 4592534 - 4593268 | 28382.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

