Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | DN590_00745 | Not Available | Negative | 159739 - 160470 | 26753.2 |
| inositol-1-monophosphatase | DN590_00750 | Not Available | Positive | 160589 - 161392 | 29193.9 |
| nickel transporter | DN590_00755 | Not Available | Negative | 161496 - 162476 | 35408.6 |
| duf1007 family protein | DN590_00760 | Not Available | Negative | 162467 - 163105 | 23903.4 |
| autoinducer 2 abc transporter substrate-binding protein | DN590_00765 | Not Available | Positive | 163526 - 164509 | 35494.0 |
| sugar abc transporter atp-binding protein | DN590_00770 | Not Available | Positive | 164613 - 166121 | 55434.4 |
| abc transporter permease | DN590_00775 | Not Available | Positive | 166114 - 167103 | 35148.7 |
| abc transporter permease | DN590_00780 | Not Available | Positive | 167105 - 168058 | 32940.9 |
| ribulokinase | DN590_00785 | Not Available | Positive | 168076 - 169713 | 59813.5 |
| phosphosugar isomerase | DN590_00790 | Not Available | Positive | 169710 - 170309 | 20855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

