Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DN590_22700 | Not Available | Positive | 4561109 - 4562149 | 38059.2 |
| protein phosphatase 2c domain-containing protein | DN590_22705 | Not Available | Positive | 4562149 - 4563786 | 59355.6 |
| kinase | DN590_22710 | Not Available | Positive | 4563812 - 4565311 | 56934.1 |
| hypothetical protein | DN590_22715 | Not Available | Negative | 4565477 - 4566559 | 40841.8 |
| hypothetical protein | DN590_22720 | Not Available | Negative | 4566920 - 4567132 | 8173.85 |
| recombinase | DN590_22725 | Not Available | Positive | 4567302 - 4568477 | 45714.1 |
| hypothetical protein | DN590_22730 | Not Available | Negative | 4568499 - 4568843 | 12880.5 |
| hypothetical protein | DN590_22735 | Not Available | Negative | 4568779 - 4569684 | 34718.1 |
| dna replication protein | DN590_22740 | Not Available | Negative | 4569694 - 4570674 | 37028.6 |
| hypothetical protein | DN590_22745 | Not Available | Negative | 4570747 - 4571193 | 17581.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

