Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large chain | DN590_22650 | Not Available | Positive | 4551904 - 4552962 | 38846.4 |
| adenine/guanine phosphoribosyltransferase | DN590_22655 | Not Available | Positive | 4552972 - 4554114 | 41941.0 |
| hypothetical protein | DN590_22660 | Not Available | Positive | 4554107 - 4554880 | 29470.4 |
| hypothetical protein | DN590_22665 | Not Available | Positive | 4554882 - 4555961 | 39584.9 |
| citrate lyase subunit beta | DN590_22670 | Not Available | Positive | 4555961 - 4556917 | 35643.4 |
| duf4236 domain-containing protein | DN590_22675 | Not Available | Positive | 4556928 - 4558136 | 45160.4 |
| tellurium resistance protein terw | DN590_22680 | Not Available | Positive | 4558154 - 4558621 | 17154.8 |
| vwa domain-containing protein | DN590_22685 | Not Available | Positive | 4559084 - 4559722 | 22642.0 |
| tellurium resistance protein terx | DN590_22690 | Not Available | Positive | 4559745 - 4560386 | 23575.9 |
| vwa domain-containing protein | DN590_22695 | Not Available | Positive | 4560386 - 4561024 | 22716.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

