Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1043 family protein | DN590_22485 | Not Available | Negative | 4525711 - 4526109 | 14964.7 |
| cell division protein zape | DN590_22490 | Not Available | Positive | 4526302 - 4527429 | 42825.7 |
| 50s ribosomal protein l13 | DN590_22495 | Not Available | Positive | 4527648 - 4528076 | 15962.4 |
| 30s ribosomal protein s9 | DN590_22500 | Not Available | Positive | 4528092 - 4528484 | 14800.1 |
| stringent starvation protein a | DN590_22510 | Not Available | Positive | 4528801 - 4529439 | 24364.4 |
| clpxp protease specificity-enhancing factor | DN590_22515 | Not Available | Positive | 4529445 - 4529948 | 18361.4 |
| c4-dicarboxylate transporter dcuc | DN590_22520 | Not Available | Negative | 4530005 - 4531372 | 48484.5 |
| hypothetical protein | DN590_22525 | Not Available | Negative | 4531626 - 4532150 | 19782.2 |
| hypothetical protein | DN590_22530 | Not Available | Negative | 4532163 - 4532573 | 15292.3 |
| hypothetical protein | DN590_22535 | Not Available | Negative | 4532674 - 4532880 | 7710.02 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

