Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | DN590_22325 | Not Available | Negative | 4492856 - 4493152 | 11240.6 |
| trna dihydrouridine synthase dusb | DN590_22330 | Not Available | Negative | 4493178 - 4494143 | 35837.1 |
| carbonic anhydrase | DN590_22335 | Not Available | Negative | 4494442 - 4495218 | 28989.4 |
| 50s ribosomal protein l11 methyltransferase | DN590_22340 | Not Available | Negative | 4495347 - 4496228 | 32065.2 |
| sodium/panthothenate symporter | DN590_22345 | Not Available | Negative | 4496240 - 4497691 | 51647.3 |
| duf997 family protein | DN590_22350 | Not Available | Negative | 4497681 - 4497923 | 9304.47 |
| acetyl-coa carboxylase biotin carboxylase subunit | DN590_22355 | Not Available | Negative | 4498031 - 4499380 | 49290.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DN590_22360 | Not Available | Negative | 4499391 - 4499861 | 16704.2 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | DN590_22370 | Not Available | Negative | 4500254 - 4500853 | 22760.7 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | DN590_22375 | Not Available | Negative | 4500854 - 4501858 | 37276.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

