Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator melr | DN590_22215 | Not Available | Negative | 4468815 - 4469747 | 35615.7 |
| alpha-glucosidase/alpha-galactosidase | DN590_22220 | Not Available | Positive | 4470017 - 4471372 | 50665.9 |
| melibiose:sodium transporter melb | DN590_22225 | Not Available | Positive | 4471465 - 4472895 | 52667.2 |
| hypothetical protein | DN590_22230 | Not Available | Positive | 4472898 - 4473152 | 9426.98 |
| duf2238 domain-containing protein | DN590_22235 | Not Available | Negative | 4473173 - 4473796 | 22954.8 |
| fumarate hydratase | DN590_22240 | Not Available | Negative | 4473944 - 4475590 | 59895.4 |
| anaerobic c4-dicarboxylate transporter | DN590_22245 | Not Available | Negative | 4475687 - 4477027 | 47982.3 |
| two-component system response regulator dcur | DN590_22250 | Not Available | Negative | 4477745 - 4478464 | 27531.8 |
| two-component system sensor histidine kinase dcus | DN590_22255 | Not Available | Negative | 4478461 - 4480092 | 60496.3 |
| Trna-thr | Not Available | Not Available | Positive | 4480649 - 4480724 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

