Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_22010 | Not Available | Positive | 4430254 - 4431033 | 29598.1 |
| hypothetical protein | DN590_22015 | Not Available | Positive | 4431080 - 4431859 | 29376.7 |
| paar domain-containing protein | DN590_22020 | Not Available | Positive | 4431861 - 4432121 | 8971.01 |
| hypothetical protein | DN590_22025 | Not Available | Positive | 4432118 - 4433524 | 53500.9 |
| transcriptional regulator | DN590_22030 | Not Available | Negative | 4433598 - 4434539 | 32787.6 |
| ribose abc transporter permease | DN590_22035 | Not Available | Negative | 4434628 - 4435623 | 34620.6 |
| d-xylose abc transporter atp-binding protein | DN590_22040 | Not Available | Negative | 4435616 - 4437139 | 55653.0 |
| histidine kinase | DN590_22045 | Not Available | Positive | 4437145 - 4437252 | 3704.54 |
| hamp domain-containing protein | DN590_22050 | Not Available | Positive | 4437254 - 4439518 | 82620.7 |
| hypothetical protein | DN590_22055 | Not Available | Positive | 4439588 - 4439917 | 13451.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

