Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_21960 | Not Available | Negative | 4418082 - 4418333 | 9253.26 |
| long-chain fatty acid transporter fadl | DN590_21965 | Not Available | Positive | 4418369 - 4419700 | 48747.6 |
| phospholipid-binding lipoprotein mlaa | DN590_21970 | Not Available | Negative | 4419760 - 4420515 | 28243.5 |
| hypothetical protein | DN590_21975 | Not Available | Positive | 4420804 - 4421745 | 34995.9 |
| Trna-arg | Not Available | Not Available | Positive | 4421821 - 4421895 | Not Available |
| dna-binding protein | DN590_21985 | Not Available | Negative | 4421942 - 4422574 | 23737.8 |
| chemotaxis protein | DN590_21990 | Not Available | Negative | 4422761 - 4424659 | 68975.4 |
| type vi secretion system tip protein vgrg | DN590_21995 | Not Available | Positive | 4424825 - 4427329 | 92642.6 |
| alpha/beta hydrolase | DN590_22000 | Not Available | Positive | 4427322 - 4429418 | 77772.0 |
| hypothetical protein | DN590_22005 | Not Available | Positive | 4429428 - 4430207 | 29441.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

