Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mdtg | DN590_21705 | Not Available | Positive | 4364476 - 4365696 | 43563.7 |
| hypothetical protein | DN590_21710 | Not Available | Negative | 4365761 - 4367092 | 50594.5 |
| pyridoxal phosphate-dependent aminotransferase | DN590_21715 | Not Available | Positive | 4367280 - 4368497 | 45598.1 |
| 5'-deoxynucleotidase | DN590_21720 | Not Available | Positive | 4368581 - 4369180 | 22763.4 |
| slc13 family permease | DN590_21725 | Not Available | Negative | 4369244 - 4371076 | 65738.0 |
| sugar phosphatase | DN590_21730 | Not Available | Negative | 4371154 - 4371831 | 23871.6 |
| yfbu family protein | DN590_21735 | Not Available | Negative | 4371824 - 4372318 | 19481.3 |
| duf412 domain-containing protein | DN590_21740 | Not Available | Negative | 4372402 - 4372857 | 17250.2 |
| acetate kinase | DN590_21745 | Not Available | Positive | 4373197 - 4374399 | 43180.9 |
| phosphate acetyltransferase | DN590_21750 | Not Available | Positive | 4374475 - 4376616 | 77120.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

