Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | DN590_21655 | Not Available | Positive | 4356659 - 4357219 | 20489.8 |
| dihydroorotase | DN590_21660 | Not Available | Positive | 4357325 - 4358371 | 38919.7 |
| dna damage-inducible protein i | DN590_21665 | Not Available | Positive | 4358437 - 4358682 | 9008.48 |
| biofilm formation regulator bsss | DN590_21670 | Not Available | Positive | 4359023 - 4359277 | 9631.23 |
| n-methyl-l-tryptophan oxidase | DN590_21675 | Not Available | Positive | 4359391 - 4360506 | 40588.9 |
| duf2770 domain-containing protein | DN590_21680 | Not Available | Positive | 4360562 - 4360675 | 4703.12 |
| cytochrome b | DN590_21685 | Not Available | Positive | 4360938 - 4361504 | 20745.6 |
| ycei family protein | DN590_21690 | Not Available | Positive | 4361506 - 4362081 | 20784.4 |
| rhodanese-related sulfurtransferase | DN590_21695 | Not Available | Negative | 4362127 - 4363179 | 39852.4 |
| lipid a biosynthesis lauroyl acyltransferase | DN590_21700 | Not Available | Positive | 4363400 - 4364320 | 35271.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

