Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_21340 | Not Available | Negative | 4296468 - 4296803 | 11947.4 |
| hypothetical protein | DN590_21345 | Not Available | Positive | 4297071 - 4297709 | 23195.9 |
| mfs transporter | DN590_21350 | Not Available | Negative | 4297743 - 4299164 | 50491.2 |
| duf2766 domain-containing protein | DN590_21355 | Not Available | Positive | 4299294 - 4299545 | 9102.04 |
| non-heme ferritin-like protein | DN590_21360 | Not Available | Negative | 4299685 - 4300188 | 19069.8 |
| dj-1 family protein | DN590_21365 | Not Available | Positive | 4300743 - 4301300 | 20021.9 |
| arabinose abc transporter substrate-binding protein | DN590_21375 | Not Available | Positive | 4301619 - 4302608 | 35346.7 |
| l-arabinose abc transporter atp-binding protein arag | DN590_21380 | Not Available | Positive | 4302741 - 4304255 | 55161.8 |
| l-arabinose abc transporter permease arah | DN590_21385 | Not Available | Positive | 4304270 - 4305256 | 34367.3 |
| trehalose-phosphatase | DN590_21390 | Not Available | Positive | 4305432 - 4306235 | 29166.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

