Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | DN590_00600 | Not Available | Negative | 118431 - 119897 | 51944.5 |
| exodeoxyribonuclease vii large subunit | DN590_00605 | Not Available | Positive | 120058 - 121404 | 50769.9 |
| transposase | DN590_00610 | Not Available | Positive | 121751 - 122299 | 22037.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 124499 - 124631 | Not Available |
| hypothetical protein | DN590_00615 | Not Available | Negative | 122598 - 128210 | 200706.0 |
| hypothetical protein | DN590_00620 | Not Available | Negative | 128372 - 129349 | 34339.4 |
| intimin-like inverse autotransporter sinh | DN590_00625 | Not Available | Negative | 129407 - 131617 | 82342.4 |
| hypothetical protein | DN590_00630 | Not Available | Negative | 131828 - 132046 | 8128.86 |
| mfs transporter | DN590_00635 | Not Available | Negative | 132315 - 133856 | 55580.6 |
| ribosome biogenesis gtpase der | DN590_00640 | Not Available | Negative | 134158 - 135630 | 55022.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

