Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | DN590_21135 | Not Available | Negative | 4263846 - 4264313 | 17220.1 |
| flagellar hook length control protein flik | DN590_21140 | Not Available | Negative | 4264418 - 4265632 | 41323.4 |
| flagella biosynthesis chaperone flij | DN590_21145 | Not Available | Negative | 4265629 - 4266072 | 17317.6 |
| flagellum-specific atp synthase flil | DN590_21150 | Not Available | Negative | 4266094 - 4267464 | 49207.4 |
| flagellar assembly protein flih | DN590_21155 | Not Available | Negative | 4267464 - 4268171 | 26012.6 |
| flagellar motor switch protein flig | DN590_21160 | Not Available | Negative | 4268164 - 4269162 | 36937.4 |
| flagellar basal body m-ring protein flif | DN590_21165 | Not Available | Negative | 4269155 - 4270828 | 61285.6 |
| flagellar hook-basal body complex protein flie | DN590_21170 | Not Available | Positive | 4271045 - 4271359 | 11234.7 |
| sira-like protein | DN590_21175 | Not Available | Negative | 4271414 - 4271647 | 8639.5 |
| yeee/yede family protein | DN590_21180 | Not Available | Negative | 4271644 - 4272909 | 46457.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

