Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | DN590_20870 | Not Available | Negative | 4220660 - 4221502 | 31937.7 |
| hypothetical protein | DN590_20875 | Not Available | Negative | 4221558 - 4222013 | 17066.2 |
| patatin-like phospholipase rssa | DN590_20880 | Not Available | Positive | 4222125 - 4223036 | 33195.3 |
| two-component system response regulator rssb | DN590_20885 | Not Available | Positive | 4223127 - 4224140 | 37247.3 |
| utp--glucose-1-phosphate uridylyltransferase galu | DN590_20890 | Not Available | Positive | 4224345 - 4225253 | 32919.1 |
| dna-binding transcriptional regulator h-ns | DN590_20895 | Not Available | Negative | 4225390 - 4225803 | 15530.5 |
| thymidine kinase | DN590_20900 | Not Available | Positive | 4226414 - 4227031 | 23250.5 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | DN590_20905 | Not Available | Negative | 4227269 - 4229947 | 96205.6 |
| marc family protein | DN590_20910 | Not Available | Positive | 4230435 - 4231082 | 23283.4 |
| hypothetical protein | DN590_20920 | Not Available | Negative | 4231380 - 4231568 | 7204.89 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

