Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | DN590_00550 | Not Available | Negative | 104581 - 105207 | 22462.5 |
| 6-phospho-beta-glucosidase | DN590_00555 | Not Available | Negative | 105391 - 106821 | 54961.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | DN590_00560 | Not Available | Positive | 107117 - 108154 | 36873.2 |
| phosphoribosylglycinamide formyltransferase | DN590_00565 | Not Available | Positive | 108151 - 108792 | 23524.9 |
| polyphosphate kinase 1 | DN590_00570 | Not Available | Positive | 109009 - 111075 | 80453.1 |
| exopolyphosphatase | DN590_00575 | Not Available | Positive | 111080 - 112621 | 58095.1 |
| sensor domain-containing phosphodiesterase | DN590_00580 | Not Available | Negative | 112601 - 114871 | 86576.5 |
| duf2633 family protein | DN590_00585 | Not Available | Positive | 115222 - 115425 | 7947.51 |
| mechanosensitive ion channel protein mscs | DN590_00590 | Not Available | Positive | 115790 - 116668 | 32322.8 |
| glutamine-hydrolyzing gmp synthase | DN590_00595 | Not Available | Negative | 116790 - 118367 | 58832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

